BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D10LP1|AL427762
(964 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1785 1820 0.0
>3x_Contig1785
Length = 37935
Score = 1820 bits (915), Expect = 0.0
Identities = 955/965 (98%), Gaps = 5/965 (0%)
Strand = Plus / Minus
Query: 1 cattcaacttaccgaagaagtccactaaccaatcagctggaatggaggaagtatggacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30568 cattcaacttaccgaagaagtccactaaccaatcagctggaatggaggaagtatggacaa 30509
Query: 61 tacatctcttgatatccttaatatcagagtagttttccaaggccctttggtataaacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30508 tacatctcttgatatccttaatatcagagtagttttccaaggccctttggtataaacctg 30449
Query: 121 ccttttctgccaaacctgcaatagttggcttatcataataagagaaaatgtcattaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30448 ccttttctgccaaacctgcaatagttggcttatcataataagagaaaatgtcattaccca 30389
Query: 181 aaatagcatcagcaacttgaggggcatttaataagttgatttccaatactctcgtttgcm 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30388 aaatagcatcagcaacttgaggggcatttaataagttgatttccaatactctcgtttgca 30329
Query: 241 aatgtccttgatcaggagtatttgatcttaaagcgtcaagtaagamagaagtaccttgtt 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 30328 aatgtccttgatcaggagtatttgatcttaaagcgtcaagtaagaaagaagtaccttgtt 30269
Query: 301 gaatgtmattctgactgaagaatatgtcggcaatcttttcaacttcaagttgagaagcag 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30268 gaatgtaattctgactgaagaatatgtcggcaatcttttcaacttcaagttgagaagcag 30209
Query: 361 tttcagggttagataataaactgatggcaaactcacttgctttgtcggggttagttctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30208 tttcagggttagataataaactgatggcaaactcacttgctttgtcggggttagttctta 30149
Query: 421 ataggttagaaatcaaaacaacgaagtttggattgtatcccaccttggcggagtatggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30148 ataggttagaaatcaaaacaacgaagtttggattgtatcccaccttggcggagtatggta 30089
Query: 481 aaatcttatcgaactgttgcmattctgcaagacatgcaattacctttggatgtacttccg 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 30088 aaatcttatcgaactgttgcaattctgcaagacatgcaattacctttggatgtacttccg 30029
Query: 541 ccttcaaataggttgccaaagccaaagtagtatcaaatggcttcacgatgtcacctaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30028 ccttcaaataggttgccaaagccaaagtagtatcaaatggcttcacgatgtcacctaatt 29969
Query: 601 cttcagagcattgtaatttgtcttcctttaagtacttttcgtataattgatttctatttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29968 cttcagagcattgtaatttgtcttcctttaagtacttttcgtataattgatttctatttt 29909
Query: 661 gttgtagaagtggtcttgtcaattcaatagactcatattgatttagtttgcccttatcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29908 gttgtagaagtggtcttgtcaattcaatagactcatattgatttagtttgcccttatcca 29849
Query: 721 acaatgtggagaaatatagtaaaattggagagattgatcctggaggtgcctggatatttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29848 acaatgtggagaaatatagtaaaattggagagattgatcctggaggtgcctggatatttt 29789
Query: 781 tcaacttgttaattgtagcttgagttcttaattgctgggatgacgcagcaactttagcag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29788 tcaacttgttaattgtagcttgagttcttaattgctgggatgacgcagcaactttagcag 29729
Query: 841 cattgctgtaatcgccttgtgataaaaggttgtcgaattgcttctcgaataaatcatcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29728 cattgctgtaatcgccttgtgataaaaggttgtcgaattgcttctcgaataaatcatcag 29669
Query: 901 cacctggtagtcc-mctctcg-agccattgtc-atgcgagggataca-tggac-acttat 955
||||||||||||| |||||| |||||||||| |||||||||||||| ||||| ||||||
Sbjct: 29668 cacctggtagtccacctctcgaagccattgtcaatgcgagggatacattggacaacttat 29609
Query: 956 tcaaa 960
|||||
Sbjct: 29608 tcaaa 29604
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7079
Number of Sequences: 1807
Number of extensions: 7079
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 964
length of database: 10,358,551
effective HSP length: 16
effective length of query: 948
effective length of database: 10,329,639
effective search space: 9792497772
effective search space used: 9792497772
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)